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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793193.1_cds_XP_016432445.1_2796
CDS Infomation

[gene=LOC107759085] [db_xref=GeneID:107759085] [protein=WD-40 repeat-containing protein MSI4-like] [partial=5'] [protein_id=XP_016432445.1] [location=join(<4361..4444,4746..4832,4919..4981,5879..5944,6081..6155,6235..6310,7114..7309,7711..7792,8753..8826,9026..9137,9254..9328,12944..13023,14826..14925,15441..15533)] [gbkey=CDS]
Sequence

TTACTGTTTCTCTCTTTCAGTTGGGGTCCCCAGTTTGAGCAAGCAACTTACAAGAACCGC
CAGCGCCTCTACCTTTCTGAGCAAACTGATGGCAGCGTTCCAAATACGCTTGTCATAGCT
AATTGTGAAGTTGTCAAACCTAGGGTTGCAGCAGCGCAACACATATCTCAGTTCAACGAA
GAAGCACGTTCGCCTTTTGTAAAGAAGTACAAAACTATTATTCATCCGGGTGAGGTGAAT
CGAATAAGGGAACTGCCTCAGGATAGCAAGATTGTGGCCACACACACTGACAGTCCTGAT
GTTCTTATTTGGGATGTTGAGTCTCAGCCTAACCGTCATGCTACCTTGGGCGTAAATAAT
TCTCGACCGGACTTGATATTGACTGGACATCAAGACAATGCTGAATTTGCGCTCGCTATG
TGCCCTTCTGAGCCTTTTGTGCTCTCTGGAGGGAAGGACAAATCGGTTGTTCTGTGGAGC
ATTCACGACCATGTGTCAACATTAGCAGCAGACCAGGGAGCTACAAAGTCTCCTGGATCT
GGAGCAAGTAACTCGAAACCTTCTGCAGAAGGCCCTACTGTTCAAGCTCGAGGTGTTTTC
CAAGGACATGATGATACCGTAGAAGATGTTCAGTTTTGCCCTTCCAGTGCACAGGAGTTT
TGCAGTGTTGGAGATGATTCCTGCCTAATACTGTGGGATGCCAGAACTGGTTCTTCTCCT
GCTGTCAAGGTAGAAAAGGCTCATAACGCTGATCTTCATTGTGTTGATTGGAATCCTCAC
GATGTAAATTATATTTTGACTGGGTCGGCAGACAACACTGTTCGCATGTTTGATCGACGA
AACCTCACTTCTGGGGGAGTGGGATCGCCTATACATATCTTTGAGGGCCATACTGCTGCT
GTGCTTTGTGTACAGTGGTCCCCAGATAAATCATCAGTCTTTGGAAGTTCTGCAGAAGAT
GGTATCCTTAACATCTGGGATTATGACAAGATTGGTAAGATGGAGGACTCTGCTGGTAGA
AAAGCTTCAACATCTCCTCCTGGCTTATTCTTTCGTCACGCTGGACATAGGGATAAGGTG
GTTGACTTCCATTGGAATGCAGCAGATCCATGGACCATTGTTAGTGTTTCAGATGATGGT
GAAAGTACTGGCGGAGGCGGTACATTACAGATATGGCGAATGATTGATCTCATTTACAGA
CCCGAAGATGAGGTTCTGAATGAACTAGAGAAGTTCAAGTCTCACCTGCTCACTTGTTCT
TAG

Peptide Sequence

PEP ID

XP_016432445.1
PEP Infomation

PREDICTED: WD-40 repeat-containing protein MSI4-like, partial [Nicotiana tabacum]
Sequence

LLFLSFSWGPQFEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAQHISQFNE
EARSPFVKKYKTIIHPGEVNRIRELPQDSKIVATHTDSPDVLIWDVESQPNRHATLGVNN
SRPDLILTGHQDNAEFALAMCPSEPFVLSGGKDKSVVLWSIHDHVSTLAADQGATKSPGS
GASNSKPSAEGPTVQARGVFQGHDDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSSP
AVKVEKAHNADLHCVDWNPHDVNYILTGSADNTVRMFDRRNLTSGGVGSPIHIFEGHTAA
VLCVQWSPDKSSVFGSSAEDGILNIWDYDKIGKMEDSAGRKASTSPPGLFFRHAGHRDKV
VDFHWNAADPWTIVSVSDDGESTGGGGTLQIWRMIDLIYRPEDEVLNELEKFKSHLLTCS

Transcript Sequence

Gene sequence data has not been registered.